No. words: 1334; after pruning: 1308


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:631)  602  0.00 0.16 0.16  MoSU024F_B11_BE493868Tu02P019C06P019C121F1_093.ab1        1   632 (32)  C MoSU024R_B11_BE493868Tu02P019C06P019C121R1_093.ab1   (38)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU024R_B11_BE493868Tu02P019C06P019C121R1_093.ab1   670 
  559    MoSU024F_B11_BE493868Tu02P019C06P019C121F1_093.ab1   520 
  595  C MoSU024R_B11_BE493868Tu02P019C06P019C121R1_093.ab1    76 
  603    MoSU024F_B11_BE493868Tu02P019C06P019C121F1_093.ab1   564 
  615  C MoSU024R_B11_BE493868Tu02P019C06P019C121R1_093.ab1    56 
  643    MoSU024F_B11_BE493868Tu02P019C06P019C121F1_093.ab1   604 
Contig length: old 702, new 703

Contig length: old 703, new 703
New start: 0