No. words: 1600; after pruning: 1574


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:695)  677  0.14 0.14 0.14  MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1        1   696 (98)  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   (110)   696     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   806 
  133    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1    22 
  141  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   666 
  159    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1    49 
  219  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   588 
  223    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   113 
  259  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   548 
  267    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   157 
  339  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   468 
  343    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   233 
  367  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   440 
  371    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   261 
  407  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   400 
  423    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   313 
  427  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   380 
  435    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   325 
  463  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   344 
  507    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   397 
  511  C MoSU005R_G06_BE494028Ld10P015F02F081R1_040.ab1   296 
  803    MoSU005F_G06_BE494028Ld10P015F02F081F1_040.ab1   693 
Contig length: old 904, new 904

Contig length: old 904, new 904
New start: 0