No. words: 1191; after pruning: 1165


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:545)  533  0.18 0.18 0.00  MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1        1   546 (60)  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   (38)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   585 
   65    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1    26 
   74  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   512 
   90    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1    51 
   98  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   488 
  118    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1    79 
  122  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   464 
  174    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   135 
  178  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   408 
  210    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   171 
  214  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   372 
  222    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   183 
  226  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   360 
  230    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   191 
  238  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1   348 
  546    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   507 
  554  C MoSU033R_F07_BE494028Td06P015F02P024E111R1_053.ab1    32 
  582    MoSU033F_F07_BE494028Td06P015F02P024E111F1_053.ab1   543 
Contig length: old 645, new 645

Contig length: old 645, new 645
New start: 0