No. words: 1142; after pruning: 1102


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.9 (1,1:546)  508  1.47 0.37 0.00  MoSU033F_B08_BE494028Td10P015F02P024E111F1_062.ab1        1   543 (16)  C MoSU033R_B08_BE494028Td10P015F02P024E111R1_062.ab1   (35)   548     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU033R_B08_BE494028Td10P015F02P024E111R1_062.ab1   583 
   79    MoSU033F_B08_BE494028Td10P015F02P024E111F1_062.ab1    42 
   94  C MoSU033R_B08_BE494028Td10P015F02P024E111R1_062.ab1   490 
  577    MoSU033F_B08_BE494028Td10P015F02P024E111F1_062.ab1   540 
Contig length: old 595, new 596

Contig length: old 596, new 596
New start: 0