No. words: 1495; after pruning: 1455


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:703)  684  0.28 0.00 0.28  MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1        1   705 (20)  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   (67)   703     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   770 
   71    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1     4 
   79  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   692 
   97    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1    30 
  113  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   658 
  117    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1    50 
  125  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   646 
  133    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1    66 
  137  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   634 
  149    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1    82 
  173  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   598 
  189    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   122 
  197  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   574 
  269    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   202 
  277  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   494 
  289    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   222 
  293  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   478 
  301    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   234 
  309  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   462 
  433    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   366 
  441  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   330 
  453    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   386 
  457  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   314 
  465    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   398 
  473  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   298 
  645    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   578 
  653  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1   118 
  689    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   622 
  697  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1    74 
  709    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   642 
  713  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1    58 
  746    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   680 
  756  C MoSU035R_C05_BE495325As01P019C04P019C101R1_043.ab1    16 
  768    MoSU035F_C05_BE495325As01P019C04P019C101F1_043.ab1   702 
Contig length: old 791, new 791

Contig length: old 791, new 791
New start: 0