No. words: 884; after pruning: 858


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.9 (1,1:286)  283  0.00 0.00 0.00  MoSU009F_D12_BE495400Ld07P015B06P015B121F1_090.ab1        1   286 (158)  C MoSU009R_D12_BE495400Ld07P015B06P015B121R1_090.ab1   (153)   287     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1  C MoSU009R_D12_BE495400Ld07P015B06P015B121R1_090.ab1   440 
  321    MoSU009F_D12_BE495400Ld07P015B06P015B121F1_090.ab1   168 
Contig length: old 597, new 597

Contig length: old 597, new 597
New start: 0