No. words: 1177; after pruning: 1151


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.4 (1,1:457)  428  0.66 0.44 0.00  MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1        3   457 (141)  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   (122)   457     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   579 
  197    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1    75 
  201  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   379 
  209    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1    87 
  225  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   355 
  233    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1   111 
  241  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   339 
  249    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1   127 
  297  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   283 
  301    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1   179 
  309  C MoSU002R_G07_BE498418Ld01P005C04C101R1_052.ab1   271 
  325    MoSU002F_G07_BE498418Ld01P005C04C101F1_052.ab1   203 
Contig length: old 719, new 720

Contig length: old 720, new 720
New start: 0