No. words: 1181; after pruning: 1155


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 8.2 (1,1:463)  443  0.00 0.22 0.00  MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1        8   464 (134)  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   (125)   458     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   583 
  157    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1    38 
  161  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   423 
  165    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1    46 
  169  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   415 
  197    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1    78 
  201  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   383 
  221    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1   102 
  229  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   355 
  233    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1   114 
  237  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   347 
  253    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1   134 
  261  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   323 
  265    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1   146 
  293  C MoSU002R_H08_BE498418Ld10P005C04C101R1_064.ab1   291 
  301    MoSU002F_H08_BE498418Ld10P005C04C101F1_064.ab1   182 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0