No. words: 624; after pruning: 598


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:259)  252  0.00 0.39 0.00  MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1        2   260 (53)  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   (51)   260     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   311 
   78    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1    27 
   82  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   230 
   86    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1    35 
   90  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   222 
   98    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1    47 
  110  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   202 
  118    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1    67 
  122  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   190 
  126    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1    75 
  158  C MoSU016R_F09_BE498418Sn24P005C04P023B051R1_069.ab1   154 
  162    MoSU016F_F09_BE498418Sn24P005C04P023B051F1_069.ab1   111 
Contig length: old 364, new 364

Contig length: old 364, new 364
New start: 0