No. words: 1770; after pruning: 1744


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.0 (1,1:1474)  261  1.02 0.68 0.68  MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1      535   828 (0)  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   (0)   942   649 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1    MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1     1 
  676  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   801 
  684    MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1   684 
  692  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   785 
  700    MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1   700 
  712  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   765 
  748    MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1   748 
  752  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   725 
  797    MoSU034F_E07_BE499652At01P019E02P019E081F1_055.ab1   797 
  801  C MoSU034R_E07_BE499652At01P019E02P019E081R1_055.ab1   676 
Contig length: old 1475, new 1476

Contig length: old 1476, new 1476
New start: 0