No. words: 1345; after pruning: 1319


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:664)  610  0.62 0.00 0.16  MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1       26   666 (39)  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   (0)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1     1 
  156  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   510 
  160    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   160 
  204  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   462 
  208    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   208 
  236  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   430 
  240    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   240 
  272  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   394 
  316    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   316 
  328  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   338 
  396    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   396 
  400  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   266 
  404    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   404 
  408  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   258 
  436    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   436 
  440  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   226 
  560    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   560 
  564  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1   102 
  576    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   576 
  608  C MoSU032R_G10_BE500615Ta17P024C05P005D111R1_068.ab1    58 
  612    MoSU032F_G10_BE500615Ta17P024C05P005D111F1_068.ab1   612 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0