No. words: 1453; after pruning: 1427


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.4 (1,1:917)  509  0.56 0.19 0.00  MoSU032F_F09_BE500615Ta22P005D05P024E061F1_069.ab1      348   879 (2)  C MoSU032R_F09_BE500615Ta22P005D05P024E061R1_069.ab1   (0)   572    40 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1    MoSU032F_F09_BE500615Ta22P005D05P024E061F1_069.ab1     1 
  644  C MoSU032R_F09_BE500615Ta22P005D05P024E061R1_069.ab1   275 
  736    MoSU032F_F09_BE500615Ta22P005D05P024E061F1_069.ab1   736 
  740  C MoSU032R_F09_BE500615Ta22P005D05P024E061R1_069.ab1   179 
Contig length: old 918, new 918

Contig length: old 918, new 918
New start: 0