No. words: 1110; after pruning: 1084


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:513)  501  0.19 0.00 0.19  MoSU025F_G02_BE590476Ta15P030A01P005C071F1_004.ab1        1   514 (40)  C MoSU025R_G02_BE590476Ta15P030A01P005C071R1_004.ab1   (43)   513     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C MoSU025R_G02_BE590476Ta15P030A01P005C071R1_004.ab1   556 
  512    MoSU025F_G02_BE590476Ta15P030A01P005C071F1_004.ab1   469 
  516  C MoSU025R_G02_BE590476Ta15P030A01P005C071R1_004.ab1    41 
  532    MoSU025F_G02_BE590476Ta15P030A01P005C071F1_004.ab1   489 
Contig length: old 596, new 597

Contig length: old 597, new 597
New start: 0