No. words: 1127; after pruning: 1101


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:529)  512  0.00 0.00 0.56  MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1        1   532 (40)  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   (26)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   555 
   70    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1    44 
   74  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   482 
  130    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   104 
  134  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   422 
  226    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   200 
  238  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   318 
  250    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   224 
  278  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   278 
  298    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   272 
  322  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   234 
  330    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   304 
  350  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1   206 
  378    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   352 
  466  C MoSU025R_E03_BE590476Ta21P030A01P005C071R1_023.ab1    90 
  486    MoSU025F_E03_BE590476Ta21P030A01P005C071F1_023.ab1   460 
Contig length: old 597, new 598

Contig length: old 598, new 598
New start: 0