No. words: 1139; after pruning: 1113


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.7 (1,1:534)  515  0.00 0.00 0.56  MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1        3   537 (41)  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1   (29)   532     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1   561 
  413    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   386 
  421  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1   141 
  441    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   414 
  445  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1   117 
  461    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   434 
  469  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1    93 
  501    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   474 
  505  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1    57 
  513    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   486 
  526  C MoSU025R_F03_BE590476Ta22P030A01P005C071R1_021.ab1    37 
  534    MoSU025F_F03_BE590476Ta22P030A01P005C071F1_021.ab1   507 
Contig length: old 604, new 605

Contig length: old 605, new 605
New start: 0