No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.6 (1,1:619)  587  0.97 0.16 0.16  MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1        3   620 (28)  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   (23)   618     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   641 
   52    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1    30 
   68  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   574 
   72    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1    50 
  132  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   510 
  136    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   114 
  144  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   498 
  148    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   126 
  184  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   458 
  188    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   166 
  264  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   378 
  272    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   250 
  280  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   362 
  284    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   262 
  344  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   298 
  364    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   342 
  420  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   222 
  424    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   402 
  448  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   194 
  456    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   434 
  468  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   174 
  472    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   450 
  488  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   154 
  508    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   486 
  516  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   126 
  524    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   502 
  528  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1   114 
  532    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   510 
  544  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1    98 
  572    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   550 
  580  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1    62 
  592    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   570 
  610  C MoSU005R_C03_BE591127As02P015H01H071R1_018.ab1    33 
  618    MoSU005F_C03_BE591127As02P015H01H071F1_018.ab1   596 
Contig length: old 669, new 670

Contig length: old 670, new 670
New start: 0