No. words: 1361; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:619)  606  0.00 0.16 0.16  MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1        1   620 (36)  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   (85)   620     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   705 
  109    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1    23 
  113  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   593 
  145    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1    59 
  153  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   553 
  157    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1    71 
  169  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   537 
  177    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1    91 
  181  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   525 
  237    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   151 
  513  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   193 
  589    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   503 
  593  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   113 
  601    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   515 
  605  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1   101 
  613    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   527 
  629  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1    77 
  645    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   559 
  649  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1    57 
  661    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   575 
  677  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1    29 
  685    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   600 
  693  C MoSU013R_H07_BE591127Ld02P018A02P018A081R1_049.ab1    13 
  701    MoSU013F_H07_BE591127Ld02P018A02P018A081F1_049.ab1   616 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0