No. words: 1491; after pruning: 1465


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.2 (1,1:630)  604  0.64 0.16 0.16  MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1        3   631 (148)  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   (83)   629     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   712 
   93    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1    11 
  101  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   612 
  119    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1    37 
  227  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   486 
  231    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   149 
  335  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   378 
  339    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   257 
  347  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   366 
  363    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   281 
  371  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   342 
  379    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   297 
  411  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   302 
  415    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   333 
  419  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   294 
  423    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   341 
  427  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   286 
  431    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   349 
  435  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   278 
  455    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   373 
  491  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   222 
  495    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   413 
  499  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   214 
  503    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   421 
  531  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   182 
  535    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   453 
  587  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   126 
  607    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   525 
  611  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1   102 
  615    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   533 
  619  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1    94 
  627    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   545 
  643  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1    70 
  655    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   573 
  659  C MoSU005R_G03_BE591127Ld03P015H01H071R1_020.ab1    54 
  687    MoSU005F_G03_BE591127Ld03P015H01H071F1_020.ab1   605 
Contig length: old 860, new 861

Contig length: old 861, new 861
New start: 0