No. words: 1264; after pruning: 1238


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:617)  582  0.00 0.00 0.34  MoSU013F_D08_BE591127Ld06P018A02P018A081F1_058.ab1       22   618 (49)  C MoSU013R_D08_BE591127Ld06P018A02P018A081R1_058.ab1   (0)   597     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1    MoSU013F_D08_BE591127Ld06P018A02P018A081F1_058.ab1     1 
  105  C MoSU013R_D08_BE591127Ld06P018A02P018A081R1_058.ab1   514 
  109    MoSU013F_D08_BE591127Ld06P018A02P018A081F1_058.ab1   109 
  501  C MoSU013R_D08_BE591127Ld06P018A02P018A081R1_058.ab1   118 
  505    MoSU013F_D08_BE591127Ld06P018A02P018A081F1_058.ab1   505 
Contig length: old 667, new 667

Contig length: old 667, new 667
New start: 0