No. words: 1247; after pruning: 1221


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   33    0.0 5.9 (1,1:652)  465  1.80 0.00 0.00  MoSU019F_F11_BE591305Ta16P023H11P005A071F1_085.ab1      155   653 (62)  C MoSU019R_F11_BE591305Ta16P023H11P005A071R1_085.ab1   (33)   499     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
33       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1    MoSU019F_F11_BE591305Ta16P023H11P005A071F1_085.ab1     1 
  510  C MoSU019R_F11_BE591305Ta16P023H11P005A071R1_085.ab1   144 
  570    MoSU019F_F11_BE591305Ta16P023H11P005A071F1_085.ab1   570 
  578  C MoSU019R_F11_BE591305Ta16P023H11P005A071R1_085.ab1    76 
  598    MoSU019F_F11_BE591305Ta16P023H11P005A071F1_085.ab1   598 
  606  C MoSU019R_F11_BE591305Ta16P023H11P005A071R1_085.ab1    48 
  638    MoSU019F_F11_BE591305Ta16P023H11P005A071F1_085.ab1   638 
Contig length: old 715, new 715

Contig length: old 715, new 715
New start: 0