No. words: 1315; after pruning: 1289


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:659)  598  0.00 0.00 0.00  MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1       55   660 (49)  C MoSU019R_B12_BE591305Ta19P023H11P005A071R1_094.ab1   (0)   606     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1    MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1     1 
  526  C MoSU019R_B12_BE591305Ta19P023H11P005A071R1_094.ab1   135 
  570    MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1   570 
  578  C MoSU019R_B12_BE591305Ta19P023H11P005A071R1_094.ab1    83 
  598    MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1   598 
  606  C MoSU019R_B12_BE591305Ta19P023H11P005A071R1_094.ab1    55 
  618    MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1   618 
  630  C MoSU019R_B12_BE591305Ta19P023H11P005A071R1_094.ab1    31 
  634    MoSU019F_B12_BE591305Ta19P023H11P005A071F1_094.ab1   634 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0