No. words: 1254; after pruning: 1228


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   19    0.0 10.3 (1,1:662)  507  0.38 0.00 0.00  MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1      144   663 (52)  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1   (19)   520     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
19       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1     1 
  512  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1   152 
  520    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1   520 
  564  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1   100 
  572    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1   572 
  588  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1    76 
  592    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1   592 
  616  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1    48 
  620    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1   620 
  632  C MoSU019R_C12_BE591305Ta20P023H11P005A071R1_092.ab1    32 
  636    MoSU019F_C12_BE591305Ta20P023H11P005A071F1_092.ab1   636 
Contig length: old 715, new 715

Contig length: old 715, new 715
New start: 0