No. words: 1494; after pruning: 1468


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:668)  644  0.00 0.00 0.30  MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1        1   669 (90)  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   (68)   667     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   735 
   80    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1    12 
   84  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   652 
   94    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1    27 
  246  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   490 
  266    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   199 
  282  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   454 
  290    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   223 
  310  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   426 
  350    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   283 
  362  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   374 
  454    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   387 
  462  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   274 
  570    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   503 
  578  C MoSU004R_A04_BE605054Ld03P005E03E091R1_021.ab1   158 
  723    MoSU004F_A04_BE605054Ld03P005E03E091F1_021.ab1   657 
Contig length: old 825, new 825

Contig length: old 825, new 825
New start: 0