No. words: 874; after pruning: 848


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 2.0 (1,1:304)  281  0.00 0.34 0.34  MoSU014F_A08_BE605054Ld03P018D06P018D121F1_064.ab1        9   301 (159)  C MoSU014R_A08_BE605054Ld03P018D06P018D121R1_064.ab1   (117)   297     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1  C MoSU014R_A08_BE605054Ld03P018D06P018D121R1_064.ab1   414 
  166    MoSU014F_A08_BE605054Ld03P018D06P018D121F1_064.ab1    56 
  174  C MoSU014R_A08_BE605054Ld03P018D06P018D121R1_064.ab1   241 
  178    MoSU014F_A08_BE605054Ld03P018D06P018D121F1_064.ab1    68 
  198  C MoSU014R_A08_BE605054Ld03P018D06P018D121R1_064.ab1   217 
  206    MoSU014F_A08_BE605054Ld03P018D06P018D121F1_064.ab1    96 
Contig length: old 569, new 570

Contig length: old 570, new 570
New start: 0