No. words: 1585; after pruning: 1545


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:664)  640  0.15 0.15 0.00  MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1        1   664 (141)  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   (115)   665     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   780 
  119    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1     4 
  123  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   658 
  135    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1    20 
  139  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   642 
  151    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1    36 
  155  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   626 
  163    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1    48 
  167  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   614 
  171    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1    56 
  223  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   558 
  227    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   112 
  281  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   499 
  293    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   178 
  301  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   479 
  321    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   206 
  341  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   439 
  345    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   230 
  377  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   403 
  501    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   386 
  517  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   263 
  629    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   514 
  633  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1   147 
  693    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   578 
  697  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1    83 
  701    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   586 
  705  C MoSU004R_G04_BE605054Ld09P005E03E091R1_024.ab1    75 
  753    MoSU004F_G04_BE605054Ld09P005E03E091F1_024.ab1   638 
Contig length: old 920, new 920

Contig length: old 920, new 920
New start: 0