No. words: 800; after pruning: 774


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:354)  329  0.00 0.00 0.56  MoSU030F_B05_BE605054Td10P024E01P005E091F1_045.ab1        1   356 (44)  C MoSU030R_B05_BE605054Td10P024E01P005E091R1_045.ab1   (46)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C MoSU030R_B05_BE605054Td10P024E01P005E091R1_045.ab1   400 
  254    MoSU030F_B05_BE605054Td10P024E01P005E091F1_045.ab1   208 
  262  C MoSU030R_B05_BE605054Td10P024E01P005E091R1_045.ab1   139 
  278    MoSU030F_B05_BE605054Td10P024E01P005E091F1_045.ab1   232 
Contig length: old 445, new 446

Contig length: old 446, new 446
New start: 0