No. words: 932; after pruning: 906


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.8 (1,1:293)  287  0.00 0.00 0.00  MoSU009F_E08_BE637663Ld07P015B03P015B091F1_056.ab1        1   291 (175)  C MoSU009R_E08_BE637663Ld07P015B03P015B091R1_056.ab1   (172)   294     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1  C MoSU009R_E08_BE637663Ld07P015B03P015B091R1_056.ab1   466 
  304    MoSU009F_E08_BE637663Ld07P015B03P015B091F1_056.ab1   132 
Contig length: old 638, new 638

Contig length: old 638, new 638
New start: 0