No. words: 1205; after pruning: 1179


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:763)  430  0.00 0.00 0.00  MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1      152   592 (0)  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   (0)   613   173 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1     1 
  275  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   490 
  283    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   283 
  299  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   466 
  303    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   303 
  339  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   426 
  343    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   343 
  367  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   398 
  375    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   375 
  387  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   378 
  411    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   411 
  419  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   346 
  427    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   427 
  443  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   322 
  459    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   459 
  463  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   302 
  467    MoSU014F_G05_BF201699Ld01P018E05P018E111F1_035.ab1   467 
  471  C MoSU014R_G05_BF201699Ld01P018E05P018E111R1_035.ab1   294 
Contig length: old 764, new 764

Contig length: old 764, new 764
New start: 0