No. words: 1235; after pruning: 1209


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:562)  533  0.71 0.18 0.00  MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1        1   563 (61)  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   (47)   564     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   611 
   51    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1     4 
   55  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   557 
   74    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1    26 
   86  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   526 
  110    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1    62 
  126  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   486 
  130    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1    82 
  154  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   458 
  166    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   118 
  190  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   422 
  194    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   146 
  230  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1   382 
  530    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   482 
  546  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1    66 
  554    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   506 
  593  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1    19 
  597    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   549 
  601  C MoSU011R_F01_BF201699Ta13P005G02P020D071R1_005.ab1    11 
  605    MoSU011F_F01_BF201699Ta13P005G02P020D071F1_005.ab1   557 
Contig length: old 672, new 672

Contig length: old 672, new 672
New start: 0