No. words: 1442; after pruning: 1416


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:1160)  265  0.00 0.00 0.00  MoSU013F_H04_BF474746Ld10P015E03P015E091F1_018.ab1      316   596 (0)  C MoSU013R_H04_BF474746Ld10P015E03P015E091R1_018.ab1   (0)   846   566 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1    MoSU013F_H04_BF474746Ld10P015E03P015E091F1_018.ab1     1 
  567  C MoSU013R_H04_BF474746Ld10P015E03P015E091R1_018.ab1   595 
Contig length: old 1161, new 1161

Contig length: old 1161, new 1161
New start: 0