No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:470)  464  0.00 0.21 0.00  MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1        1   471 (151)  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   (133)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   605 
  192    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1    58 
  196  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   410 
  232    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1    98 
  236  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   370 
  268    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1   134 
  276  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   330 
  284    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1   150 
  288  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   318 
  340    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1   206 
  352  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1   254 
  388    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1   254 
  536  C MoSU006R_A10_BF474966Ld03P015C05C111R1_069.ab1    70 
  540    MoSU006F_A10_BF474966Ld03P015C05C111F1_069.ab1   406 
Contig length: old 756, new 756

Contig length: old 756, new 756
New start: 0