No. words: 1249; after pruning: 1223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:501)  490  0.00 0.20 0.20  MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1        1   502 (127)  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   (118)   502     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   620 
  155    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1    36 
  163  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   458 
  175    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1    56 
  191  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   430 
  203    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1    84 
  211  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   410 
  223    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   104 
  227  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   394 
  235    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   116 
  239  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   382 
  247    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   128 
  255  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   366 
  275    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   156 
  279  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   342 
  295    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   176 
  359  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   262 
  387    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   268 
  399  C MoSU006R_C10_BF474966Ld05P015C05C111R1_070.ab1   222 
  427    MoSU006F_C10_BF474966Ld05P015C05C111F1_070.ab1   308 
Contig length: old 747, new 748

Contig length: old 748, new 748
New start: 0