No. words: 1389; after pruning: 1363


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:651)  632  0.00 0.00 0.15  MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1        1   652 (35)  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   (51)   651     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   702 
   63    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1    12 
   67  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   636 
   71    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1    20 
   91  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   612 
   99    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1    48 
  115  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   588 
  135    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1    84 
  175  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   528 
  435    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   384 
  515  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   188 
  559    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   508 
  583  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   120 
  591    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   540 
  595  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1   108 
  607    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   556 
  623  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1    80 
  639    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   588 
  643  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1    60 
  647    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   596 
  651  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1    52 
  655    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   604 
  663  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1    40 
  671    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   620 
  675  C MoSU023R_C01_BF475129As01P018B06P018B121R1_011.ab1    28 
  679    MoSU023F_C01_BF475129As01P018B06P018B121F1_011.ab1   628 
Contig length: old 737, new 738

Contig length: old 738, new 738
New start: 0