No. words: 1539; after pruning: 1513


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 15.0 (1,1:738)  678  0.00 0.14 0.00  MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1        4   716 (0)  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   (86)   737    24 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   823 
  158    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1    74 
  166  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   658 
  178    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1    94 
  182  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   642 
  190    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   106 
  226  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   598 
  242    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   158 
  250  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   574 
  270    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   186 
  318  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   506 
  330    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   246 
  338  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   486 
  342    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   258 
  398  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   426 
  506    MoSU034F_F04_BF482529Ld08P019G01P019G071F1_022.ab1   422 
  514  C MoSU034R_F04_BF482529Ld08P019G01P019G071R1_022.ab1   310 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0