No. words: 884; after pruning: 858


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.9 (1,1:750)  128  0.00 0.00 0.00  MoSU013F_D10_BF482781Ld06P018H02P018H081F1_074.ab1      528   660 (0)  C MoSU013R_D10_BF482781Ld06P018H02P018H081R1_074.ab1   (0)   224    92 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  68 nodes

 36 str. conn. components

Path
    1    MoSU013F_D10_BF482781Ld06P018H02P018H081F1_074.ab1     1 
  555  C MoSU013R_D10_BF482781Ld06P018H02P018H081R1_074.ab1   197 
  559    MoSU013F_D10_BF482781Ld06P018H02P018H081F1_074.ab1   559 
  563  C MoSU013R_D10_BF482781Ld06P018H02P018H081R1_074.ab1   189 
  571    MoSU013F_D10_BF482781Ld06P018H02P018H081F1_074.ab1   571 
  583  C MoSU013R_D10_BF482781Ld06P018H02P018H081R1_074.ab1   169 
Contig length: old 751, new 751

Contig length: old 751, new 751
New start: 0