No. words: 1554; after pruning: 1528


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:720)  691  0.55 0.14 0.00  MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1        1   721 (65)  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1   (46)   722     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1   768 
   56    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1     9 
   80  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1   689 
   91    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1    44 
  603  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1   166 
  607    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1   560 
  615  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1   154 
  707    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1   660 
  715  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1    54 
  727    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1   680 
  757  C MoSU013R_A09_BF482781Tu01P018H02P018H081R1_079.ab1    12 
  765    MoSU013F_A09_BF482781Tu01P018H02P018H081F1_079.ab1   718 
Contig length: old 833, new 833

Contig length: old 833, new 833
New start: 0