No. words: 1027; after pruning: 1001


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.2 (1,1:339)  311  0.00 0.00 0.59  MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1        1   341 (166)  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   (181)   339     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   520 
  230    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1    49 
  234  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   287 
  242    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1    61 
  246  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   275 
  298    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   117 
  326  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   195 
  330    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   149 
  366  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   155 
  382    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   201 
  390  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1   131 
  394    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   213 
  438  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1    83 
  442    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   261 
  462  C MoSU035R_H09_BF485253Ld02P019E04P019E101R1_065.ab1    59 
  466    MoSU035F_H09_BF485253Ld02P019E04P019E101F1_065.ab1   285 
Contig length: old 687, new 688

Contig length: old 688, new 688
New start: 0