No. words: 1713; after pruning: 1687


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:1199)  492  0.00 0.00 0.00  MoSU034F_G05_BF485401Ld01P019A02P019A081F1_035.ab1      388   900 (0)  C MoSU034R_G05_BF485401Ld01P019A02P019A081R1_035.ab1   (0)   813   301 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    MoSU034F_G05_BF485401Ld01P019A02P019A081F1_035.ab1     1 
  515  C MoSU034R_G05_BF485401Ld01P019A02P019A081R1_035.ab1   686 
  519    MoSU034F_G05_BF485401Ld01P019A02P019A081F1_035.ab1   519 
  575  C MoSU034R_G05_BF485401Ld01P019A02P019A081R1_035.ab1   626 
  579    MoSU034F_G05_BF485401Ld01P019A02P019A081F1_035.ab1   579 
  603  C MoSU034R_G05_BF485401Ld01P019A02P019A081R1_035.ab1   598 
  607    MoSU034F_G05_BF485401Ld01P019A02P019A081F1_035.ab1   607 
  667  C MoSU034R_G05_BF485401Ld01P019A02P019A081R1_035.ab1   534 
Contig length: old 1200, new 1200

Contig length: old 1200, new 1200
New start: 0