No. words: 1841; after pruning: 1787


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:1092)  717  0.67 0.00 0.00  MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1      193   940 (0)  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   (0)   901   154 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1     1 
  384  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   710 
  396    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   396 
  428  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   666 
  432    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   432 
  444  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   650 
  452    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   452 
  456  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   638 
  464    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   464 
  476  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   618 
  480    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   480 
  484  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   610 
  492    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   492 
  505  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   589 
  509    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   509 
  513  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   581 
  533    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   533 
  549  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   545 
  553    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   553 
  561  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   533 
  577    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   577 
  589  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   505 
  593    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   593 
  601  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   493 
  609    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   609 
  613  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   481 
  617    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   617 
  625  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   469 
  661    MoSU034F_A05_BF485401Tu01P019A02P019A081F1_047.ab1   661 
  665  C MoSU034R_A05_BF485401Tu01P019A02P019A081R1_047.ab1   429 
Contig length: old 1093, new 1093

Contig length: old 1093, new 1093
New start: 0