No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:481)  469  0.00 0.00 0.21  MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1        1   482 (167)  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   (190)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   671 
  226    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1    36 
  238  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   434 
  262    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1    72 
  266  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   406 
  270    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1    80 
  366  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   306 
  394    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   204 
  398  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   274 
  546    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   356 
  554  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   118 
  558    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   368 
  562  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1   110 
  582    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   392 
  590  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1    82 
  594    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   404 
  602  C MoSU034R_G11_BG274853Ld01P019H01P019H071R1_083.ab1    70 
  606    MoSU034F_G11_BG274853Ld01P019H01P019H071F1_083.ab1   416 
Contig length: old 838, new 839

Contig length: old 839, new 839
New start: 0