No. words: 1023; after pruning: 997


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:372)  363  0.00 0.00 0.27  MoSU004F_B02_BG604857Ld04P005B02B081F1_013.ab1        1   373 (134)  C MoSU004R_B02_BG604857Ld04P005B02B081R1_013.ab1   (144)   372     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU004R_B02_BG604857Ld04P005B02B081R1_013.ab1   516 
  198    MoSU004F_B02_BG604857Ld04P005B02B081F1_013.ab1    54 
  206  C MoSU004R_B02_BG604857Ld04P005B02B081R1_013.ab1   311 
  210    MoSU004F_B02_BG604857Ld04P005B02B081F1_013.ab1    66 
  234  C MoSU004R_B02_BG604857Ld04P005B02B081R1_013.ab1   283 
  242    MoSU004F_B02_BG604857Ld04P005B02B081F1_013.ab1    98 
  426  C MoSU004R_B02_BG604857Ld04P005B02B081R1_013.ab1    91 
  430    MoSU004F_B02_BG604857Ld04P005B02B081F1_013.ab1   286 
Contig length: old 650, new 651

Contig length: old 651, new 651
New start: 0