No. words: 1022; after pruning: 996


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:371)  363  0.27 0.00 0.00  MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1        1   372 (124)  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1   (154)   372     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1   526 
  160    MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1     6 
  164  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1   363 
  220    MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1    66 
  232  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1   295 
  240    MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1    86 
  272  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1   255 
  276    MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1   122 
  436  C MoSU004R_F02_BG604857Ld08P005B02B081R1_015.ab1    91 
  440    MoSU004F_F02_BG604857Ld08P005B02B081F1_015.ab1   286 
Contig length: old 650, new 650

Contig length: old 650, new 650
New start: 0