No. words: 488; after pruning: 462


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 0.6 (1,1:123)  106  0.81 0.81 1.61  MoSU029F_A03_BM138650Sn27P005H01P023C011F1_031.ab1        2   125 (58)  C MoSU029R_A03_BM138650Sn27P005H01P023C011R1_031.ab1   (182)   123     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  52 nodes

 28 str. conn. components

Path
    1  C MoSU029R_A03_BM138650Sn27P005H01P023C011R1_031.ab1   305 
  219    MoSU029F_A03_BM138650Sn27P005H01P023C011F1_031.ab1    37 
  227  C MoSU029R_A03_BM138650Sn27P005H01P023C011R1_031.ab1    79 
  239    MoSU029F_A03_BM138650Sn27P005H01P023C011F1_031.ab1    57 
  251  C MoSU029R_A03_BM138650Sn27P005H01P023C011R1_031.ab1    55 
  255    MoSU029F_A03_BM138650Sn27P005H01P023C011F1_031.ab1    73 
  271  C MoSU029R_A03_BM138650Sn27P005H01P023C011R1_031.ab1    36 
  291    MoSU029F_A03_BM138650Sn27P005H01P023C011F1_031.ab1   109 
Contig length: old 364, new 365

Contig length: old 365, new 365
New start: 0