No. words: 1583; after pruning: 1543


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:1306)  272  0.36 0.00 0.00  MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1      495   770 (0)  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   (0)   813   538 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1    MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1     1 
  610  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   698 
  614    MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1   614 
  630  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   678 
  634    MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1   634 
  638  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   670 
  654    MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1   654 
  670  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   638 
  718    MoSU010F_H01_BQ170165Ld02P005F06P005F121F1_001.ab1   718 
  722  C MoSU010R_H01_BQ170165Ld02P005F06P005F121R1_001.ab1   586 
Contig length: old 1307, new 1307

Contig length: old 1307, new 1307
New start: 0