No. words: 1396; after pruning: 1370


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.3 (1,1:658)  630  0.00 0.00 0.00  MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1        5   656 (36)  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   (49)   655     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   704 
   53    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1     8 
   65  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   640 
   73    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1    28 
   81  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   624 
   85    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1    40 
  117  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   588 
  121    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1    76 
  129  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   576 
  165    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   120 
  181  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   524 
  185    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   140 
  189  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   516 
  197    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   152 
  237  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   468 
  253    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   208 
  261  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   444 
  265    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   220 
  277  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   428 
  285    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   240 
  301  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   404 
  345    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   300 
  393  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1   312 
  605    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   560 
  617  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1    88 
  633    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   588 
  649  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1    56 
  661    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   616 
  669  C MoSU027R_B10_BQ170165Ta12P005F06P030H091R1_078.ab1    36 
  681    MoSU027F_B10_BQ170165Ta12P005F06P030H091F1_078.ab1   636 
Contig length: old 737, new 737

Contig length: old 737, new 737
New start: 0