No. words: 1458; after pruning: 1432


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:684)  665  0.00 0.15 0.00  MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1        1   685 (38)  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   (49)   686     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   735 
   82    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1    32 
   98  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   638 
  106    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1    56 
  130  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   606 
  138    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1    88 
  150  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   586 
  174    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   124 
  214  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   522 
  390    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   340 
  442  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   294 
  454    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   404 
  474  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   262 
  478    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   428 
  594  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1   142 
  602    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   552 
  638  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1    98 
  642    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   592 
  654  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1    82 
  686    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   636 
  698  C MoSU024R_C05_CD373508As01P019E03P019E091R1_043.ab1    38 
  706    MoSU024F_C05_CD373508As01P019E03P019E091F1_043.ab1   656 
Contig length: old 773, new 773

Contig length: old 773, new 773
New start: 0