No. words: 1755; after pruning: 1729


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:981)  750  0.00 0.00 0.00  UCD017F_G02_BE399200LD09P028D01D071F1_004.ab1      112   884 (0)  C UCD017R_G02_BE399200LD09P028D01D071R1_004.ab1   (0)   871    99 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1    UCD017F_G02_BE399200LD09P028D01D071F1_004.ab1     1 
  347  C UCD017R_G02_BE399200LD09P028D01D071R1_004.ab1   636 
Contig length: old 982, new 982

Contig length: old 982, new 982
New start: 0