No. words: 492; after pruning: 466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.2 (1,1:-97)  176  2.54 0.00 0.51  UCD030F_A11_BE442788Ta11P036C04P036C071F1_095.ab1        1   197 (0)    UCD030R_A11_BE442788Ta11P036C04P036C071R1_095.ab1       99   294 (1) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    UCD030R_A11_BE442788Ta11P036C04P036C071R1_095.ab1     1 
Contig length: old 295, new 295

Contig length: old 295, new 295
New start: 0