No. words: 1316; after pruning: 1290


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.7 (1,1:621)  536  0.36 0.00 0.00  UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1        1   553 (1)  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   (140)   622    70 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   762 
  168    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1    28 
  184  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   579 
  200    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1    60 
  216  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   547 
  220    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1    80 
  228  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   535 
  248    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1   108 
  276  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   487 
  284    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1   144 
  292  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   471 
  320    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1   180 
  332  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   431 
  352    UCD024F_G07_BE444541LD03P028F03P028F091F1_051.ab1   212 
  404  C UCD024R_G07_BE444541LD03P028F03P028F091R1_051.ab1   359 
Contig length: old 762, new 762

Contig length: old 762, new 762
New start: 0