No. words: 1107; after pruning: 1081


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.6 (1,1:470)  436  1.92 0.00 0.00  UCD029F_F11_BE489901Ta16P036G06P012B101F1_085.ab1        3   471 (68)  C UCD029R_F11_BE489901Ta16P036G06P012B101R1_085.ab1   (99)   469     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C UCD029R_F11_BE489901Ta16P036G06P012B101R1_085.ab1   568 
  553    UCD029F_F11_BE489901Ta16P036G06P012B101F1_085.ab1   456 
  557  C UCD029R_F11_BE489901Ta16P036G06P012B101R1_085.ab1    12 
  561    UCD029F_F11_BE489901Ta16P036G06P012B101F1_085.ab1   464 
Contig length: old 636, new 636

Contig length: old 636, new 636
New start: 0